Human

Statistics about the current GENCODE Release (version 50)

The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

General stats

Further details on this version's gene and transcript types

biotype	genes	transcripts
artifact	19	19
IG_C_gene	14	23
IG_C_pseudogene	9	9
IG_D_gene	37	37
IG_J_gene	18	18
IG_J_pseudogene	3	3
IG_pseudogene	1	1
IG_V_gene	146	146
IG_V_pseudogene	187	187
lncRNA	34866	189136
miRNA	1878	1878
misc_RNA	2207	2207
Mt_rRNA	2	2
Mt_tRNA	22	22
non_stop_decay	0	106
nonsense_mediated_decay	0	91818
processed_pseudogene	9484	9485
processed_transcript	0	12
protein_coding	20107	278455
protein_coding_CDS_not_defined	0	26568
protein_coding_LoF	0	86
retained_intron	0	34250
ribozyme	8	8
rRNA	47	47
rRNA_pseudogene	497	497
scaRNA	52	52
snoRNA	985	985
snRNA	1901	1901
sRNA	5	5
TEC	1019	1108
TR_C_gene	6	6
TR_D_gene	5	5
TR_J_gene	79	79
TR_J_pseudogene	4	4
TR_V_gene	107	107
TR_V_pseudogene	33	33
transcribed_processed_pseudogene	1148	1148
transcribed_unitary_pseudogene	206	206
transcribed_unprocessed_pseudogene	1584	1586
translated_processed_pseudogene	2	2
unitary_pseudogene	90	90
unprocessed_pseudogene	1951	1951
vault_RNA	4	4