Human

Statistics about the current GENCODE Release (version 37)

The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

General stats

Total No of Genes 60651
Protein-coding genes 19951
Long non-coding RNA genes 17948
Small non-coding RNA genes 7569
Pseudogenes 14773
- processed pseudogenes 10669
- unprocessed pseudogenes 3563
- unitary pseudogenes 242
- polymorphic pseudogenes 48
- pseudogenes 15
Immunoglobulin/T-cell receptor gene segments
- protein coding segments 409
- pseudogenes 236
Total No of Transcripts 234485
Protein-coding transcripts 86054
- full length protein-coding 60169
- partial length protein-coding 25885
Nonsense mediated decay transcripts 18193
Long non-coding RNA loci transcripts 48741
 
Total No of distinct translations 63527
Genes that have more than one distinct translations 13694

Further details on this version's gene and transcript types

biotype genes transcripts
IG_C_gene 14 24
IG_C_pseudogene 9 9
IG_D_gene 37 37
IG_J_gene 18 18
IG_J_pseudogene 3 3
IG_pseudogene 1 1
IG_V_gene 145 154
IG_V_pseudogene 187 187
lncRNA 16892 47032
miRNA 1881 1881
misc_RNA 2212 2212
Mt_rRNA 2 2
Mt_tRNA 22 22
non_stop_decay 0 96
nonsense_mediated_decay 0 18193
polymorphic_pseudogene 48 69
processed_pseudogene 10166 10168
processed_transcript 0 28813
protein_coding 19951 86054
pseudogene 15 31
retained_intron 0 30337
ribozyme 8 8
rRNA 47 47
rRNA_pseudogene 497 497
scaRNA 49 49
scRNA 1 1
snoRNA 943 943
snRNA 1901 1901
sRNA 5 5
TEC 1056 1147
TR_C_gene 6 6
TR_D_gene 4 4
TR_J_gene 79 79
TR_J_pseudogene 4 4
TR_V_gene 106 107
TR_V_pseudogene 33 33
transcribed_processed_pseudogene 501 501
transcribed_unitary_pseudogene 144 146
transcribed_unprocessed_pseudogene 948 948
translated_processed_pseudogene 2 2
translated_unprocessed_pseudogene 1 1
unitary_pseudogene 98 97
unprocessed_pseudogene 2614 2615
vault_RNA 1 1