The Mouse GENCODE Reference Release Set

Freeze date * GENCODE release Ensembl release Release date Genome assembly version UCSC version Notes
11.2017 M17 92 04.2018 GRCm38 - Latest mouse gene set
07.2011 M1 65 12.2011 GRCm37 - Used in ENCODE milestone comparative analysis publications such as Pervouchine DD, et al. Nat Commun, 2015 PMID: 25582907

* Month of the Havana data cutoff.

Please also see the FTP site.

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