GENCODE

Statistics about the current Human GENCODE Release (version 27)

* The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

Compare with the previous release (GENCODE 26) »

Version 27 (January 2017 freeze, GRCh38) - Ensembl 90

General stats

Total No of Genes
58288
Protein-coding genes
19836
Long non-coding RNA genes
15778
Small non-coding RNA genes
7569
Pseudogenes
14694
   - processed pseudogenes:
10704
   - unprocessed pseudogenes:
3469
   - unitary pseudogenes:
206
   - polymorphic pseudogenes:
63
   - pseudogenes:
18
Immunoglobulin/T-cell receptor gene segments
   - protein coding segments:
410
   - pseudogenes:
234
 
 
Total No of Transcripts
200401
Protein-coding transcripts
80930
   - full length protein-coding:
55406
   - partial length protein-coding:
25524
Nonsense mediated decay transcripts
14208
Long non-coding RNA loci transcripts
27908




Total No of distinct translations
60297
Genes that have more than one distinct translations
13580


Further details on this version's gene and transcript types

biotype genes transcripts
3prime_overlapping_ncRNA 31 35
antisense_RNA 5521 11050
bidirectional_promoter_lncRNA 19 40
IG_C_gene 14 23
IG_C_pseudogene 9 9
IG_D_gene 37 37
IG_J_gene 18 18
IG_J_pseudogene 3 3
IG_pseudogene 1 1
IG_V_gene 144 144
IG_V_pseudogene 188 188
lincRNA 7499 13348
macro_lncRNA 1 1
miRNA 1881 1881
misc_RNA 2213 2227
Mt_rRNA 2 2
Mt_tRNA 22 22
non_coding 3 3
non_stop_decay 0 84
nonsense_mediated_decay 0 14208
polymorphic_pseudogene 63 89
processed_pseudogene 10240 10243
processed_transcript 544 28230
protein_coding 19836 80930
pseudogene 18 37
retained_intron 0 27239
ribozyme 8 8
rRNA 544 544
scaRNA 49 49
scRNA 1 1
sense_intronic 905 963
sense_overlapping 189 339
snoRNA 943 955
snRNA 1900 1900
sRNA 5 5
TEC 1066 1165
TR_C_gene 6 6
TR_D_gene 4 4
TR_J_gene 79 79
TR_J_pseudogene 4 4
TR_V_gene 108 108
TR_V_pseudogene 30 30
transcribed_processed_pseudogene 462 462
transcribed_unitary_pseudogene 111 113
transcribed_unprocessed_pseudogene 830 836
translated_processed_pseudogene 2 2
unitary_pseudogene 95 95
unprocessed_pseudogene 2639 2640
vaultRNA 1 1
 
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