GENCODE

Statistics about the current Human GENCODE Release (version 26)

* The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

Compare with the previous release (GENCODE 25) »

Version 26 (October 2016 freeze, GRCh38) - Ensembl 88

General stats

Total No of Genes
58219
Protein-coding genes
19817
Long non-coding RNA genes
15787
Small non-coding RNA genes
7568
Pseudogenes
14636
   - processed pseudogenes:
10700
   - unprocessed pseudogenes:
3419
   - unitary pseudogenes:
211
   - polymorphic pseudogenes:
54
   - pseudogenes:
18
Immunoglobulin/T-cell receptor gene segments
   - protein coding segments:
410
   - pseudogenes:
234
 
 
Total No of Transcripts
199325
Protein-coding transcripts
80531
   - full length protein-coding:
55030
   - partial length protein-coding:
25501
Nonsense mediated decay transcripts
14113
Long non-coding RNA loci transcripts
27720




Total No of distinct translations
60172
Genes that have more than one distinct translations
13546


Further details on this version's gene and transcript types

biotype genes transcripts
3prime_overlapping_ncRNA 31 35
antisense 5529 11038
bidirectional_promoter_lncRNA 8 24
IG_C_gene 14 17
IG_C_pseudogene 9 9
IG_D_gene 37 37
IG_J_gene 18 18
IG_J_pseudogene 3 3
IG_pseudogene 1 1
IG_V_gene 144 144
IG_V_pseudogene 188 188
lincRNA 7520 13231
macro_lncRNA 1 1
miRNA 1881 1881
misc_RNA 2213 2227
Mt_rRNA 2 2
Mt_tRNA 22 22
non_coding 3 3
non_stop_decay 0 84
nonsense_mediated_decay 0 14113
polymorphic_pseudogene 54 72
processed_pseudogene 10248 10251
processed_transcript 533 27915
protein_coding 19817 80531
pseudogene 18 38
retained_intron 0 27186
ribozyme 8 8
rRNA 543 543
scaRNA 49 49
scRNA 1 1
sense_intronic 904 961
sense_overlapping 190 343
snoRNA 943 955
snRNA 1900 1900
sRNA 5 5
TEC 1068 1168
TR_C_gene 6 6
TR_D_gene 4 4
TR_J_gene 79 79
TR_J_pseudogene 4 4
TR_V_gene 108 108
TR_V_pseudogene 30 30
transcribed_processed_pseudogene 452 452
transcribed_unitary_pseudogene 95 97
transcribed_unprocessed_pseudogene 749 753
unitary_pseudogene 116 116
unprocessed_pseudogene 2670 2671
vaultRNA 1 1
 
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