Release 7

• Updated Main file with added ncRNA_host attributes-removed them as biotypes, gene annotation on three levels: gencode.v7.annotation_updated_ncrna_host.gtf.gz
• Main file, gene annotation on three levels: gencode.v7.annotation.gtf.gz
• Protein-coding transcript sequences in FASTA format: gencode.v7.pc_transcripts.fa.gz
• Translations of protein-coding transcripts in FASTA format: gencode.v7.pc_translations.fa.gz
• (Retrotransposed) pseudogenes predicted by the Yale & UCSC pipelines, but not by Havana: gencode.v7.2wayconspseudos.gtf.gz
• PolyA features annotated by Havana: gencode.v7.polyAs.gtf.gz
• tRNA structures predicted by tRNA-Scan: gencode.v7.tRNAs.gtf.gz
• Long non-coding RNAs with updated gene biotypes: gencode.v7.long_noncoding_RNAs.gtf.gz

    Statistics of this Gencode version are found here.